Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0009800 Intron-Intron chr16:12178899-12180254 chr16:12085042-12086397 1356 nt 0.4897
hsa_SNX29_0009900 Intron-Intron chr16:12181381-12182193 chr16:12087524-12088336 813 nt 0.5547
hsa_chr16_0017000 Intergenic-Intergenic chr16:12190583-12190865 chr16:12096726-12097008 283 nt 0.5406
hsa_SNX29_0010000 Intron-Intron chr16:12190821-12191443 chr16:12096964-12097586 623 nt 0.5249
hsa_chr16_0017100 Intergenic-Intergenic chr16:12192251-12192707 chr16:12098394-12098850 457 nt 0.5449
hsa_SNX29_0010100 Intron-Intron chr16:12192727-12193733 chr16:12098870-12099876 1007 nt 0.5501
hsa_SNX29_0010200 Intron-Intron chr16:12198349-12199132 chr16:12104492-12105275 784 nt 0.4477
hsa_chr16_0017200 Intergenic-Intergenic chr16:12199164-12201416 chr16:12105307-12107559 2253 nt 0.5042
hsa_SNX29_0010300 Intron-Exon-Intron chr16:12199560-12223615 chr16:12105703-12129758 129 nt 0.6202
hsa_SNX29_0010400 Intron-Intron chr16:12199923-12202116 chr16:12106066-12108259 2194 nt 0.4936
Showing 121 to 130 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].