Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0005500 Exon-Exon chr16:12136754-12172772 chr16:12042897-12078915 1155 nt 0.5437
hsa_SNX29_0006500 Exon-Exon chr16:12140241-12140311 chr16:12046384-12046454 71 nt 0.4366
hsa_SNX29_0006600 Exon-Exon chr16:12140241-12146079 chr16:12046384-12052222 696 nt 0.4928
hsa_SNX29_0007900 Exon-Exon chr16:12145704-12618698 chr16:12051847-12524841 1570 nt 0.5293
hsa_SNX29_0008200 Intron-Exon-Intron chr16:12155366-12162989 chr16:12061509-12069132 214 nt 0.5981
hsa_SNX29_0008300 Exon-Exon chr16:12155385-12172772 chr16:12061528-12078915 278 nt 0.6007
hsa_SNX29_0008400 Exon-Exon chr16:12155385-12497386 chr16:12061528-12403529 913 nt 0.5597
hsa_SNX29_0009000 Exon-Exon chr16:12162914-12172772 chr16:12069057-12078915 159 nt 0.5849
hsa_SNX29_0011100 Exon-Exon chr16:12220490-12220553 chr16:12126633-12126696 64 nt 0.5781
hsa_SNX29_0011200 Exon-Exon chr16:12220490-12223615 chr16:12126633-12129758 193 nt 0.6062
Showing 11 to 20 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].