Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0011200

Sequence Length

193 nt

GC Content

0.6062

GUGAACUGCGCCAGGCCACUGUGGCCAUGAUGAACAGGAAGGAUGAGCUGGAGGAGGAGAACAGAUCACUGCGAAACCUGCUCGACGGUGAGAUGGAGCACUCAGCCGCGCUCCGGCAAGAGGUGGACACCUUGAAAAGGAAGGUGGCUGAACAGGAGGAGCGGCAGGGCAUGAAGGUCCAGGCGCUGGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-67.40 kcal/mol

Ensemble Metrics

Free Energy: -69.03

Frequency: 0.0715

Diversity: 40.92

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.((((((((.((.(((((((..(........)..))).)))).))(((.....((..(((((((((.......))).))))))..)).....))).(((((.((((.......(((...((((((.......))))))))).....))))..))))).((((......)))).))).))))))))

Thermodynamic Ensemble Prediction

,,,..{{{,||({((((.((.(((((((..{........,..))).)))).)){{{.....((..(((((((((.......))).))))))..)).....}||{(((((.,(((.....{{(((...,|||||.....}}),,))))))},...,,,}.,|||,|.((((......)))).)}),))))))})