Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr16_0017900 Intergenic-Intergenic chr16:12371225-12371472 chr16:12277368-12277615 248 nt 0.3952
hsa_SNX29_0016600 Intron-Exon-Intron chr16:12371790-12372445 chr16:12277933-12278588 656 nt 0.3857
hsa_SNX29_0016800 Intron-Exon-Intron chr16:12371790-12382565 chr16:12277933-12288708 172 nt 0.4535
hsa_SNX29_0016500 Intron-Exon-Intron chr16:12371790-12385352 chr16:12277933-12291495 250 nt 0.4040
hsa_SNX29_0016700 Exon-Exon chr16:12371790-12450136 chr16:12277933-12356279 221 nt 0.5475
hsa_SNX29_0016900 Exon-Exon chr16:12371790-12497386 chr16:12277933-12403529 56 nt 0.4464
hsa_chr16_0018000 Intergenic-Intergenic chr16:12381718-12381901 chr16:12287861-12288044 184 nt 0.3696
hsa_SNX29_0017000 Intron-Intron chr16:12384511-12384919 chr16:12290654-12291062 409 nt 0.4401
hsa_SNX29_0017100 Intron-Intron chr16:12393093-12393783 chr16:12299236-12299926 691 nt 0.3965
hsa_chr16_0018200 Intergenic-Intergenic chr16:12399926-12400162 chr16:12306069-12306305 237 nt 0.4135
Showing 191 to 200 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].