Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0016700

Sequence Length

221 nt

GC Content

0.5475

UGCCAAAUCUUUGGAGUGUUGAUGGAGAAGUUACAGUAGCUGAACAGAAGCCGGGAGAAAUUGCUGAAGAACUCGCAAGCUCCUACGAAAGAAAGCUCAUCGAGGUGGCAGAGAUGCAUGGCGAGCUGAUUGAGUUCAACGAGCGCCUGCACAGGGCCCUGGUAGCCAAGGAAGCCCUCGUGUCCCAGAUGAGGCAGGAGCUCAUCGAUCUCCGGGGACCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-63.90 kcal/mol

Ensemble Metrics

Free Energy: -68.83

Frequency: 0.0003

Diversity: 38.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((((((.((((((((((...((.((((((((.......)))..........)))))))...)))...(((((((...........((((((..((.((((....((((.((((..((((......)))..)..)))))))).((((((((((...)).)))..)))))..)))))).))))))..)))))))))))))))))))))))...

Thermodynamic Ensemble Prediction

.......(((((((((.((((((({,{..,((.((({{(((.......}}}.,.,,,...,|}}}}}}...))).,.(((((((..........,((((((..((.((((,.,.((((.((((.,(({,,,,...})),.},,)))))))),{(((((((((...)),}))..))))),.)))))).)))))),,)))))))))))))))))))))))...