Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0017200 Intron-Intron chr16:12400218-12400722 chr16:12306361-12306865 505 nt 0.4416
hsa_SNX29_0017300 Intron-Intron chr16:12408067-12412400 chr16:12314210-12318543 250 nt 0.4280
hsa_chr16_0018300 Intergenic-Intergenic chr16:12413368-12413707 chr16:12319511-12319850 340 nt 0.5147
hsa_SNX29_0017400 Intron-Intron chr16:12415209-12415613 chr16:12321352-12321756 405 nt 0.5407
hsa_SNX29_0017500 Intron-Exon-Intron chr16:12448620-12450136 chr16:12354763-12356279 1517 nt 0.4430
hsa_SNX29_0017600 Exon-Exon chr16:12450020-12497386 chr16:12356163-12403529 255 nt 0.5569
hsa_SNX29_0017700 Intron-Intron chr16:12466401-12466550 chr16:12372544-12372693 150 nt 0.4333
hsa_chr16_0018500 Intergenic-Intergenic chr16:12488580-12488723 chr16:12394723-12394866 144 nt 0.4931
hsa_SNX29_0017800 Intron-Exon-Intron chr16:12490789-12492358 chr16:12396932-12398501 1570 nt 0.4535
hsa_SNX29_0018000 Exon-Exon chr16:12492303-12497386 chr16:12398446-12403529 138 nt 0.5000
Showing 201 to 210 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].