Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0019000 Exon-Exon chr16:12571576-12618696 chr16:12477719-12524839 279 nt 0.4946
hsa_SNX29_0019100 Exon-Exon chr16:12571576-12618698 chr16:12477719-12524841 281 nt 0.4947
hsa_chr16_0018700 Intergenic-Intergenic chr16:12578513-12579533 chr16:12484656-12485676 1021 nt 0.4731
hsa_SNX29_0019300 Intron-Intron chr16:12589283-12589604 chr16:12495426-12495747 322 nt 0.4410
hsa_chr16_0018800 Intergenic-Intergenic chr16:12591951-12592923 chr16:12498094-12499066 973 nt 0.4234
hsa_SNX29_0019400 Intron-Intron chr16:12597873-12598122 chr16:12504016-12504265 250 nt 0.4120
hsa_chr16_0018900 Intergenic-Intergenic chr16:12601029-12601200 chr16:12507172-12507343 172 nt 0.5465
hsa_SNX29_0019500 Intron-Exon-Intron chr16:12609366-12618698 chr16:12515509-12524841 250 nt 0.4560
hsa_chr16_0019100 Intergenic-Intergenic chr16:12612321-12612572 chr16:12518464-12518715 252 nt 0.5714
hsa_chr16_0019200 Intergenic-Intergenic chr16:12627312-12627540 chr16:12533455-12533683 229 nt 0.5240
Showing 221 to 230 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].