Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0011300 Exon-Exon chr16:12220490-12668146 chr16:12126633-12574289 250 nt 0.3560
hsa_SNX29_0014700 Intron-Exon-Intron chr16:12293458-12334209 chr16:12199601-12240352 250 nt 0.3840
hsa_SNX29_0014800 Exon-Exon chr16:12293458-12371893 chr16:12199601-12278036 187 nt 0.4545
hsa_SNX29_0015800 Intron-Intron chr16:12320720-12321466 chr16:12226863-12227609 747 nt 0.4793
hsa_SNX29_0017900 Exon-Exon chr16:12492303-12668146 chr16:12398446-12574289 250 nt 0.3240
hsa_SNX29_0019600 Exon-Exon chr16:12618559-12618698 chr16:12524702-12524841 140 nt 0.5500
hsa_SNX29_0019700 Exon-Exon chr16:12618559-12668146 chr16:12524702-12574289 250 nt 0.3480
hsa_CTD-3037G24.3_0000100 Intron-Intron chr16:12662576-12662888 chr16:12568719-12569031 313 nt 0.5687
hsa_CTD-3037G24.3_0000200 Intron-Intron chr16:12663779-12664352 chr16:12569922-12570495 574 nt 0.5209
hsa_CTD-3037G24.3_0000300 Intron-Intron chr16:12664066-12664531 chr16:12570209-12570674 466 nt 0.5258
Showing 21 to 30 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].