Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0003100 Intron-Intron chr16:12096901-12097188 chr16:12003044-12003331 288 nt 0.4826
hsa_SNX29_0003200 Intron-Exon chr16:12099292-12121301 chr16:12005435-12027444 250 nt 0.4440
hsa_SNX29_0003300 Intron-Intron chr16:12100231-12102269 chr16:12006374-12008412 98 nt 0.5918
hsa_SNX29_0003400 Intron-Intron chr16:12101292-12101983 chr16:12007435-12008126 692 nt 0.5087
hsa_SNX29_0003500 Intron-Exon chr16:12120889-12146079 chr16:12027032-12052222 1290 nt 0.5357
hsa_SNX29_0004000 Exon-Exon chr16:12121177-12146079 chr16:12027320-12052222 131 nt 0.5802
hsa_SNX29_0003900 Exon-Exon chr16:12121177-12155503 chr16:12027320-12061646 1121 nt 0.5424
hsa_SNX29_0004100 Exon-Exon chr16:12121177-12162989 chr16:12027320-12069132 76 nt 0.6184
hsa_SNX29_0004200 Exon-Exon chr16:12121177-12172772 chr16:12027320-12078915 208 nt 0.5721
hsa_SNX29_0004300 Intron-Exon-Intron chr16:12121177-12177251 chr16:12027320-12083394 125 nt 0.5840
Showing 61 to 70 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].