Basic Information

Symbol
circSNX29
RNA Class
circRNA
Alias
Sorting Nexin 29 RUNDC2A RUN Domain-Containing Protein 2A RUN Domain Containing 2A Sorting Nexin-29 FLJ12363 A-388D4.1
Location (GRCh37)
16:12070602-12668146 UCSC Genome Browser
Location (GRCh38)
16:11976745-12574289
UCSC Genome Browser Search in Marker Scope
Host gene
SNX29
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SNX29_0004400 Exon-Exon chr16:12121177-12223615 chr16:12027320-12129758 135 nt 0.6222
hsa_SNX29_0004500 Exon-Exon chr16:12121177-12293540 chr16:12027320-12199683 306 nt 0.5458
hsa_chr16_0016600 Intergenic-Intergenic chr16:12126312-12128552 chr16:12032455-12034695 2241 nt 0.4623
hsa_SNX29_0004600 Intron-Intron chr16:12126327-12128569 chr16:12032470-12034712 2243 nt 0.4610
hsa_SNX29_0004800 Intron-Exon-Intron chr16:12136646-12162989 chr16:12042789-12069132 76 nt 0.6184
hsa_SNX29_0004700 Intron-Exon-Intron chr16:12136646-12177251 chr16:12042789-12083394 250 nt 0.3920
hsa_SNX29_0004900 Intron-Exon-Intron chr16:12136646-12223615 chr16:12042789-12129758 288 nt 0.6007
hsa_SNX29_0005000 Intron-Exon-Intron chr16:12136680-12223615 chr16:12042823-12129758 71 nt 0.4366
hsa_SNX29_0005300 Intron-Exon chr16:12136704-12146079 chr16:12042847-12052222 231 nt 0.6623
hsa_SNX29_0005100 Intron-Exon-Intron chr16:12136704-12162989 chr16:12042847-12069132 1122 nt 0.5499
Showing 71 to 80 of 234 entries
Forensic Context

A study in mice demonstrated that the circSNX29 is expressed at higher levels in embryonic skeletal muscle compared to adult tissue and its expression correlates with myoblast differentiation, where it functions as a sponge for miR-744 to increase Wnt5a and CaMKIId expression [Di Agostino et al. DOI:10.3389/fcell.2020.00389].