Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0004700

Sequence Length

250 nt

GC Content

0.3920

GGGAUACUCUGUUACAAUCUCCAACUUCGCCUAGAGGCUUUGUGUGUUCCUCUCCCAGUGCUGAGUGCCCCAGGCCGAGUGCCAGGCGCCUGUGCCCUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACUAUGUCUCAAAAAAAAAAAAAACCCCUCAAAACUUAUUUUCUUACAGUUCUGGAGGCUGAAAGACCAAGAUCAAGGUGCCAGCAGGGUUGAUUUCUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.70 kcal/mol

Ensemble Metrics

Free Energy: -43.26

Frequency: 0.0006

Diversity: 45.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((((.(((.........)))...(((((((((...........)))))...)).)).))))))))((((..(((.(((((....))).)).)))...................................................(((...)))..............((((((((..((((((......)).))))...)))((((....(((........)))..)))).)))))....))))

Thermodynamic Ensemble Prediction

(((.(((((.({.,,........,{..,{{,.,{{||,...,.,.}..,,,,,...,},)).))))))))((({..(((.(((((....))).)).)))...................................................(((...)))..............((((((((..{((({{......}}.)))}.,.)})((((....(((........)))..)))).)))))....})))