Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0000100 Exon-Exon chr1:158580496-158596797 chr1:158610706-158627007 2154 nt 0.4466
hsa_SPTA1_0001800 Exon-Exon chr1:158589012-158604465 chr1:158619222-158634675 1098 nt 0.4727
hsa_SPTA1_0001900 Exon-Exon chr1:158589012-158639353 chr1:158619222-158669563 250 nt 0.3880
hsa_SPTA1_0002000 Exon-Exon chr1:158589012-158648324 chr1:158619222-158678534 250 nt 0.3840
hsa_SPTA1_0002600 Exon-Exon chr1:158589960-158617510 chr1:158620170-158647720 2703 nt 0.4909
hsa_SPTA1_0002700 Exon-Exon chr1:158595936-158644465 chr1:158626146-158674675 250 nt 0.3800
hsa_SPTA1_0010300 Intron-Intron chr1:158624601-158624741 chr1:158654811-158654951 141 nt 0.5177
hsa_SPTA1_0010800 Exon-Exon chr1:158626354-158631199 chr1:158656564-158661409 434 nt 0.4608
hsa_SPTA1_0000200 Exon-Exon chr1:158582607-158584096 chr1:158612817-158614306 199 nt 0.4271
hsa_SPTA1_0000300 Exon-Exon chr1:158582607-158585193 chr1:158612817-158615403 188 nt 0.5106
Showing 1 to 10 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].