Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0012800 Exon-Exon chr1:158636106-158653286 chr1:158666316-158683496 331 nt 0.4532
hsa_SPTA1_0012900 Exon-Exon chr1:158636106-158656327 chr1:158666316-158686537 44 nt 0.3636
hsa_SPTA1_0013000 Intron-Exon-Intron chr1:158637398-158637852 chr1:158667608-158668062 245 nt 0.4408
hsa_SPTA1_0013100 Exon-Exon chr1:158637648-158650519 chr1:158667858-158680729 322 nt 0.4720
hsa_SPTA1_0013200 Exon-Exon chr1:158637648-158653286 chr1:158667858-158683496 331 nt 0.4532
hsa_SPTA1_0013300 Exon-Exon chr1:158637648-158655137 chr1:158667858-158685347 126 nt 0.4286
hsa_SPTA1_0013400 Exon-Exon chr1:158637648-158656327 chr1:158667858-158686537 723 nt 0.4550
hsa_SPTA1_0013500 Intron-Intron chr1:158637889-158639197 chr1:158668099-158669407 1309 nt 0.3575
hsa_SPTA1_0013600 Exon-Exon chr1:158639198-158641986 chr1:158669408-158672196 255 nt 0.4863
hsa_SPTA1_0013700 Exon-Exon chr1:158639198-158646085 chr1:158669408-158676295 234 nt 0.4487
Showing 131 to 140 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].