Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0001300 Exon-Exon chr1:158587327-158597513 chr1:158617537-158627723 165 nt 0.4545
hsa_SPTA1_0001400 Exon-Exon chr1:158587327-158606551 chr1:158617537-158636761 52 nt 0.3846
hsa_SPTA1_0001600 Exon-Exon chr1:158587829-158589124 chr1:158618039-158619334 113 nt 0.4867
hsa_SPTA1_0001700 Exon-Exon chr1:158587829-158590256 chr1:158618039-158620466 113 nt 0.4867
hsa_SPTA1_0001500 Exon-Exon chr1:158587829-158612766 chr1:158618039-158642976 2106 nt 0.4843
hsa_SPTA1_0002100 Exon-Exon chr1:158589012-158590256 chr1:158619222-158620466 410 nt 0.4902
hsa_SPTA1_0002300 Exon-Exon chr1:158589012-158606551 chr1:158619222-158636761 190 nt 0.4789
hsa_SPTA1_0002200 Exon-Exon chr1:158589012-158608031 chr1:158619222-158638241 1550 nt 0.4800
hsa_SPTA1_0002400 Exon-Exon chr1:158589012-158624538 chr1:158619222-158654748 113 nt 0.4867
hsa_SPTA1_0002500 Intron-Intron chr1:158589792-158589959 chr1:158620002-158620169 168 nt 0.3393
Showing 21 to 30 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].