Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_SPTA1_0003900 Exon-Exon chr1:158604333-158613215 chr1:158634543-158643425 237 nt 0.4473
hsa_SPTA1_0004000 Exon-Exon chr1:158604333-158614186 chr1:158634543-158644396 191 nt 0.4607
hsa_SPTA1_0004100 Exon-Exon chr1:158604333-158615384 chr1:158634543-158645594 233 nt 0.4592
hsa_SPTA1_0004200 Exon-Exon chr1:158604333-158622443 chr1:158634543-158652653 121 nt 0.5620
hsa_SPTA1_0003200 Exon-Exon chr1:158604333-158623215 chr1:158634543-158653425 2529 nt 0.4994
hsa_SPTA1_0004300 Intron-Exon-Intron chr1:158604333-158633288 chr1:158634543-158663498 250 nt 0.4880
hsa_SPTA1_0004400 Exon-Exon chr1:158605703-158609797 chr1:158635913-158640007 486 nt 0.5247
hsa_SPTA1_0004500 Exon-Exon chr1:158605703-158644465 chr1:158635913-158674675 121 nt 0.5620
hsa_SPTA1_0004600 Exon-Exon chr1:158605744-158612275 chr1:158635954-158642485 202 nt 0.5495
hsa_SPTA1_0004700 Intron-Intron chr1:158605857-158606430 chr1:158636067-158636640 574 nt 0.4251
Showing 41 to 50 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].