Basic Information

Symbol
circSPTA1
RNA Class
circRNA
Alias
Spectrin Alpha, Erythrocytic 1 EL2 Spectrin Alpha Chain, Erythrocytic 1 Erythroid Alpha-Spectrin Elliptocytosis 2 SPTA Spectrin, Alpha, Erythrocytic 1 (Elliptocytosis 2) Spectrin Alpha Chain, Erythrocyte Alpha-I Spectrin SPH3 HPP HS3
Location (GRCh37)
1:158580496-158656382 UCSC Genome Browser
Location (GRCh38)
1:158610706-158686592
UCSC Genome Browser Search in Marker Scope
Host gene
SPTA1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr1_0234900 Intergenic-Intergenic chr1:158606650-158607706 chr1:158636860-158637916 1057 nt 0.3576
hsa_SPTA1_0004800 Exon-Exon chr1:158607823-158612766 chr1:158638033-158642976 747 nt 0.4793
hsa_SPTA1_0004900 Exon-Exon chr1:158607823-158619737 chr1:158638033-158649947 237 nt 0.5443
hsa_SPTA1_0005000 Exon-Exon chr1:158609372-158609797 chr1:158639582-158640007 243 nt 0.4979
hsa_SPTA1_0005100 Exon-Exon chr1:158609372-158612332 chr1:158639582-158642542 375 nt 0.5040
hsa_SPTA1_0005200 Exon-Exon chr1:158609372-158612766 chr1:158639582-158642976 243 nt 0.4979
hsa_SPTA1_0005300 Exon-Exon chr1:158609372-158613215 chr1:158639582-158643425 209 nt 0.4928
hsa_SPTA1_0005400 Exon-Exon chr1:158609372-158614186 chr1:158639582-158644396 111 nt 0.5045
hsa_SPTA1_0005500 Exon-Exon chr1:158609372-158618443 chr1:158639582-158648653 145 nt 0.5448
hsa_SPTA1_0005600 Exon-Exon chr1:158609372-158619737 chr1:158639582-158649947 105 nt 0.5143
Showing 51 to 60 of 175 entries
Forensic Context

A study in mice demonstrated that the circSPTA1 is an example of a circular RNA that is abundant and functional in the nervous system [Wang et al. DOI:10.4103/1673-5374.308100].