Basic Information

Symbol
circTCF20
RNA Class
circRNA
Alias
Transcription Factor 20 SPBP AR1 Stromelysin-1 Platelet-Derived Growth Factor-Responsive Element Binding Protein Stromelysin-1 PDGF-Responsive Element-Binding Protein SPRE-Binding Protein Nuclear Factor SPBP TCF-20 Transcription Factor 20 (AR1) Protein AR1 KIAA0292 DDVIBA
Location (GRCh37)
22:42557340-42730570 UCSC Genome Browser
Location (GRCh38)
22:42161334-42334564
UCSC Genome Browser Search in Marker Scope
Host gene
TCF20
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_TCF20_0000600 Exon-Exon chr22:42564615-42575708 chr22:42168609-42179702 100 nt 0.5700
hsa_TCF20_0000700 Exon-Exon chr22:42564615-42611347 chr22:42168609-42215341 169 nt 0.5562
hsa_TCF20_0000800 Intron-Intron chr22:42564750-42565852 chr22:42168744-42169846 1103 nt 0.5186
hsa_TCF20_0000900 Intron-Intron chr22:42564831-42565852 chr22:42168825-42169846 1022 nt 0.5137
hsa_TCF20_0001200 Exon-Exon chr22:42565853-42611347 chr22:42169847-42215341 144 nt 0.5347
hsa_TCF20_0001100 Exon-Intergenic chr22:42565853-42664402 chr22:42169847-42268396 250 nt 0.3760
hsa_TCF20_0001300 Intron-Intron chr22:42571726-42572802 chr22:42175720-42176796 1077 nt 0.4940
hsa_chr22_0199400 Intergenic-Intergenic chr22:42573058-42573416 chr22:42177052-42177410 359 nt 0.4903
hsa_TCF20_0001400 Exon-Exon chr22:42575615-42611347 chr22:42179609-42215341 250 nt 0.4480
hsa_TCF20_0001500 Intron-Intron chr22:42577655-42578195 chr22:42181649-42182189 541 nt 0.5102
Showing 11 to 20 of 55 entries
Forensic Context

A study in mice and human patients demonstrated that circRNA-Tcf20 is significantly downregulated in lung tissues and bronchoalveolar lavage fluid from subjects with sepsis-induced acute lung injury/ARDS, where it functions within a competing endogenous RNA subnetwork and its co-expressed hub genes are enriched in pathways like PI3K-Akt signaling [Xu et al. DOI:10.1080/01902148.2024.2429184].