Basic Information

Symbol
circZKSCAN1
RNA Class
circRNA
Alias
Zinc Finger With KRAB And SCAN Domains 1 KOX18 ZSCAN33 PHZ-37 ZNF139 ZNF36 Zinc Finger Protein With KRAB And SCAN Domains 1 Zinc Finger Protein 36 (KOX 18) Zinc Finger Protein 139 Zinc Finger Protein KOX18 Zinc Finger Protein 36
Location (GRCh37)
7:99597006-99644169 UCSC Genome Browser
Location (GRCh38)
7:99999383-100046546
UCSC Genome Browser Search in Marker Scope
Host gene
ZKSCAN1
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ZKSCAN1_0001800 Exon-Intergenic chr7:99621042-99644169 chr7:100023419-100046546 250 nt 0.3640
hsa_ZKSCAN1_0002600 Exon-Exon chr7:99621048-99621930 chr7:100023425-100024307 37 nt 0.3514
hsa_chr7_0684100 Intergenic-Intergenic chr7:99621059-99621860 chr7:100023436-100024237 84 nt 0.5714
hsa_chr7_0684200 Intergenic-Intergenic chr7:99621069-99621860 chr7:100023446-100024237 481 nt 0.5447
hsa_ZKSCAN1_0002700 Exon-Exon chr7:99621076-99621930 chr7:100023453-100024307 544 nt 0.5441
hsa_ZKSCAN1_0002800 Exon-Intron chr7:99621085-99628191 chr7:100023462-100030568 1037 nt 0.5294
hsa_ZKSCAN1_0002900 Exon-Exon chr7:99621175-99621930 chr7:100023552-100024307 535 nt 0.5477
hsa_ZKSCAN1_0003000 Exon-Exon chr7:99621175-99627998 chr7:100023552-100030375 754 nt 0.5504
hsa_ZKSCAN1_0003100 Exon-Exon chr7:99621211-99621496 chr7:100023588-100023873 286 nt 0.5559
hsa_chr7_0684300 Intergenic-Intergenic chr7:99621516-99621860 chr7:100023893-100024237 124 nt 0.5242
Showing 31 to 40 of 63 entries
Forensic Context

A study in mice demonstrated that the circZKSCAN1 exhibits liver-specific expression, with its expression rates in liver being much higher than in other tissues [Sema Misir et al. DOI:10.1038/s41418-022-00948-7].