Sequence Details

BLAST PRIMER
Symbol
hsa_CLOCK_0001200
Sequence Length
228 nt
GC Content
0.3904
AAACCACAUCUUAGCAAACAUUUGAAGGCCUACCUAGAUGAGUAUGGCAUCGUUCCUUCCCCAAGGGAAAGACCAAACUAGUAAAAGCAAUAGAAAGAUAAAUCGGUAUUGUUUGGGGUGAUGAAUACUUCAGAGGUCUUUAGAAAGGAGGAAGUGAGCAGUUUUUUGUUGUGUUGUGUUUUGUUUUGUUUUGUUUUUGUAAGCAGUUUCAUGGGUUGAGGCAAGCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-48.80 kcal/mol
Ensemble Metrics
Free Energy: -52.97
Frequency: 0.0012
Diversity: 29.30
Structure Visualization
Structure Prediction
MFE Structure Prediction
((..((((.(.(((((((.....((..(((((((.....).))).))).))(((((((((((.....(((((((..........((((((((....((....))..))))))))((((((.....))))))...))))))).....)).))))).)))).....))))))).).))))))((((((.....(((((....)))))((((((.....))))))))))))
Thermodynamic Ensemble Prediction
((..((((.{.(((((((.....{{..(((((({.....}.))).))).))(((((((((((.....(((((((..........,{((((((....({....))..))))))||((((((.....))))))},.))))))).....)).))))).)))).....})))))).}.))))}){(({{(,{{,,(((((....)))))((((((.....))))))))))))
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