Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_CTPS1_0004200

Sequence Length

250 nt

GC Content

0.4040

AUGCCAAUUCUACAGAGUUUGACCCUACGACCAGUCAUCCCGUGGUCGUAGACAUGCCAGAACACAACCCAGGGCAGAUGGGCGGAACCAUGAGGCUGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCAUUUGAUCCUUUUAACACUCCUGUGGAAAGACCAGGUUGGUGUCACCAUCUCCAGUUUGCACAUGAGGAACAUUCUGCAUAUGAGGAAGACCUGAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.70 kcal/mol

Ensemble Metrics

Free Energy: -53.83

Frequency: 0.0002

Diversity: 56.59

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((((((((((((..(((((((((.........)))))))))................(((((..(..((((......))))..).)))))...............................................................)))).))).)))))))........))))))))(.((((((((.((.((((.(((.....)))..)))).))..)).)))..)).).)

Thermodynamic Ensemble Prediction

((({{{{(((({((({(({(,...(((((((((.........)))))))))...,,...,.......(((((..(..((((......))))..).)))))........................................................|,.....}}}}.}|}|,}))}}}|,....,,|}})))}},.,}}|(((,.{{|{.{||{{{,|,,...,))),)}},)}.}}.)))}})),)))