Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RAPGEF6_0019500

Sequence Length

207 nt

GC Content

0.4928

GUGCAGUGGCUCAUGCUUGUAGUCCCAGCACCUCAAGAGGCCUAGGUGGAAGGAUCACCAGGAAUUCAAGACCAGCCUGGGGAACAUAGCAAGACCUGUCUCUAUUAAAAAAUAAAUUGACCAAGCAUGGUGGUGGACACCUGUAGUCCCAGCUAUUCAGAAGGCUGAGGCAGGAGGAUCACUUGAGUGCAAGACUUUGAAGCUACA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-52.50 kcal/mol

Ensemble Metrics

Free Energy: -57.31

Frequency: 0.0004

Diversity: 50.99

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((..((((((.((......((((.((((((..((((.....(.((.(((((.............))))).)).)........)))))))))).....................(((.((((.....))))))).(((.(((((........))))).)))..)))).......)).))))))....)).)))))).

Thermodynamic Ensemble Prediction

.....((((((({{((((((..(((((((...((..(((.(((.((((,.....})))))))..)))..)}...}}}))))).,},.}))}...((((((({,,,,.....,,,....{((...(((.((((.....))))})).))).{((((........)))))))))))),,.....||,{|,|,}}}},},,)),}))))).