Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0000800

Sequence Length

250 nt

GC Content

0.3360

AUGAGAAAAAUUGAGAGGUGCACUUCUGAUGAUGGUGGAUUAGGCAAUUUGGACUAACUCUUCCACUGAGAACAACUAGAAAAGCUGGAUCAAAUAUAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAACAUCAGGAGUACCUGAAGGAAAAAUUAUCCUUGAGGACAACCAAACACAAAGUGGGAGGGCAGGACCACUAUCCUCAGCAUGGAAACCCUGCUAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-41.70 kcal/mol

Ensemble Metrics

Free Energy: -45.50

Frequency: 0.0021

Diversity: 45.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....................((((((((((..((((((..((..............))..))))))........((((.....))))...................................................................)))))))))).(((.(((((.......))))).)))....(((.........)))(((((.((.....)).)))))((((.((....))))))..

Thermodynamic Ensemble Prediction

.,,,,....,,,.{{{((,..,|||||{{.({((((((,{{((.,........}}},((((((((((........((((.....)))).....................................................................,,.{{.{{.(((.(((((.......))))).)))}}..)}........))))))))))..,..)))))}))}))|(((.((...,)))))}..