Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0005400

Sequence Length

250 nt

GC Content

0.3320

CCACAUAGUAACAGCAUUAAAGAAUAACCUUUUUCUUAACAGGCCCAUCACUAGAGGAUUCUAUGACUCCAUCCUUUGAAUGAGUGUUGUUUUUGUGUAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAAUGUCAUCAAACCACUGUUCACCAUCAGGGUCUCCUCAUCGAGUAGAUGUUAUAGGAAGGACUAGAUCAUGGUCACCCAGUGUCCCUCCUCCACAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.70 kcal/mol

Ensemble Metrics

Free Energy: -38.15

Frequency: 0.0037

Diversity: 34.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((((.(((((((((.(((((........)))))........(((...((((((((...........)))))))).)))))))))))).))))))................................................................(((.(((........)))))).....((((.....))))....((((.((((.......(((....)))..)))).))))........

Thermodynamic Ensemble Prediction

..((((((.(((((((((.(((((........)))))........,,{,..((((((((...........)))))))).,})))))))))).)))))).......................................................,,.......(((.(((........)))))),{,,,({{{,,,..))))....|(({.((({..,,,..(((....)))..))),.)))).,......