Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0006500

Sequence Length

250 nt

GC Content

0.3440

GAAAAGAAGCCCAUCUGUGUCCAGAGAUCAGAAUAGAAGAUACGACCAAAGGGAAGAAAGAGAGGAAUAUUCACAGUAUGCUACUUCGGAUACCGCAAUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUUCUUUACUUUUGCUUCUGCAAGUACAGAAGUUAAUGAAGAAACUGAGCAUGUGGAAGAGCAGGGGGAAGAAAAGCAGGGAGAAGAGGUCAAGGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-31.60 kcal/mol

Ensemble Metrics

Free Energy: -35.79

Frequency: 0.0011

Diversity: 64.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........(((.(((((.((((.(..((((...........(..((....))..).....(.((..(((((..((((...))))..))))))).)........................................................((((((((.....(((((((......)))))))...))))))))))))...).))))...)))))))).......((...((.......))...))..

Thermodynamic Ensemble Prediction

........{((,,((({(.(((,.,..{({{...........,..((....)}..,.....{.({..{{{||..,{{{|.|},}}..}|})})}........................................................,{(((((((.{((({((((((({{.{{.|||,,,|,...,,},,,,))),}}.)}))))..,))))))))}}}}}}}|,..,||....,,,)}..}))..