Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0017600

Sequence Length

248 nt

GC Content

0.4234

AGCCAAAGCCUUAGUAGAAGAACAACGCCUUUUGUUCCUAGGGUUCAGAUAAAACUAUGGUUUGACAAGGUUGGUCACCAAUUAAUAGUUACAAUUUUGGGAGCAAAAGAUCUCCCUUCCAGGGAAGAUGGGAGGCCAAGGAAUCCUUAUGUUAAAAUUUACUUUCUUCCAGACAGAAGAAGUUAAUGAAGAAACUGAGCAUGUGGAAGAGCAGGGGGAAGAAAAGCAGGGAGAAGAGGUCAAGGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.20 kcal/mol

Ensemble Metrics

Free Energy: -60.56

Frequency: 0.0002

Diversity: 50.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((...(((((................(((((((((((((((((..(((.......((((..(((.......))))))).......)))..))))))))))))))))).((((((((((..((...........))..))).(((((.(((............((((((..(((.....((((........)))).....)))))))))))).)))))........))))))).)))))...)))..

Thermodynamic Ensemble Prediction

.(((...(((((.,,.......,.....(((((((((((((((((..{{{...,,,,((({.{(((.......))))))).....,,)))..))))))))))))))))).((((((({{,|}||,.,,|{{,,..|}...,..||||,.{(({....,{..((((((((({.{{{.....((((........)))).....)})))))))).}}}},}),....,}})))))},.)))))...)))..