Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0023100

Sequence Length

356 nt

GC Content

0.4719

UCGGAAUGUGGAACAGGGGCUUCGAGGGACCCGCACUAUGACCGGACAUUAUAAUACAAUUAGCCGAAUGGACAGACAUCGUGUCAUGGAUGACCAUUAUUCUCCAGAUAGAGACAGGUCUCAUCCUCGUACUGGGUCUGUCCAGACAAGCCCAUCAAGUACUCCAGUCGCAGGACGAAGGGGCCGACAGCUUCCACAGCUUCCACCAAAGGGAACGUUGGAUAGAAAAGUUACAUGGGAAGACCAGCAGAAAAAGGUGAAUGGUACAAUAAGUGAUGACAAACCAUUGCCGAAAAAGAAACACCAGUCUGAGACAGGAAAAUUGGUCCUGGAAAUUGAAACCCUAAAUGUCAUGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.60 kcal/mol

Ensemble Metrics

Free Energy: -86.79

Frequency: 0.0000

Diversity: 98.76

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((..(((......((((((.((.(((((((...(((((.(((..................)))....((((.......))))..((((((..(((..((((......))))..))).))))))))))).))))))).)).....))))))......)))))).)(((...((((.((((.....(((.((((.((((((((.......)))).))))...............(((.....))).((((....((((.............((((((......))))))...........))))..))))....((((.......)))))))).)))...))))...)))).)))

Thermodynamic Ensemble Prediction

(.(((..(((......(((((({({,({{{{{{..,|,{{,.(((.,,.,............,}}}..{{(((((((.,,{||}|..(((((({{.,,..((((......))))..))}.}))))).,)))}}))))))}))},...,)))))......)))))).)(({...((((.{(((,....{,{,((((,{{((((((......,)))).))))},.......,,,...(((.....))).{{{{....((({,{{{{{.......{{,,{{....}}))))))}..........}}}}.,))}}...|{|{{.....,,))))),,,.}}}...))))...)))).)))