Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0025100

Sequence Length

362 nt

GC Content

0.5000

GGAUUGUGAAGCAGCAGAUAGACAGCCAUAUCACAGAUCCAGAUCAACAGAACAACGGCCUCUCCUUGAGCGGACCACCACCCGCUCCAGAUCCACUGAACGUCCUGAUACAAACCUCAUGAGGUCGAUGCCUUCAUUAAUGACUGGAAGAUCUGCCCCUCCUUCACCUGCCUUAUCGAGGUCUCAUCCUCGUACUGGGUCUGUCCAGACAAGCCCAUCAAGUACUCCAGUCGCAGGACGAAGGGGCCGACAGCUUCCACAGCUUCCACCAAAGGGAACGUUGGAUAGAAACAAUGGAGUCAAGGAGAUAGAACCUUAUGAAGGAAAAUUGGUCCUGGAAAUUGAAACCCUAAAUGUCAUGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.70 kcal/mol

Ensemble Metrics

Free Energy: -99.22

Frequency: 0.0000

Diversity: 82.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..(((((....((.........))....)))))..((((((((((.....((.(((((((.....((((((........))))))(((.....))).......(((........))).))))))).))(((((((....(((((((((.((.((((((...((.(((((......((((......))))(((((((((.(((....))).))))....))))).......)))))..)))))))).))...))))).....((((......)))).(((((........))))).))))((((........)))))))))))....))))).))))).........))(..........)

Thermodynamic Ensemble Prediction

((.((((({....{{.,.....,.))....))}}},.{(((((((({.....{,.((({{{{..,,.((((((........)))))),||.....}}}...,,.,||,......,,|||,||||||}.|,((((({{...,(((((((((.((.((((((.,,{,.(((((......((((......))))(((((((((.(((....))).))))}...,)))).......)))))..)})))))).))...))))).....((((......}))),(((((........))))).})))||||........)))))))))))....}))))}})))).........},,...,,,,,},}