Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0027600

Sequence Length

587 nt

GC Content

0.4072

AAGUUACAUGGGAAGACCAGCAGAAAAAGGUGAAUGGUACAAUAAGUGAUGACAAACCAUUGCCGAAAAAGAAACACCAGUCUGAGACAGGAAAAUUGGUCCUGGAAAUUGAAACCCUAAAUGUCAUGAAAGAACUGGACUCUACAAGGAGAAGAUAUGCAGUAUCGAUCAGGAUGGGAUCCUCAUAGAGGGGCAGAUAAUGUUUCUACUAAAUCUUCGGACAGUGAUGUAAGUGAUAUAUCUGCGGUUUCAAGGACUAGUAGUGCUUCUCGUUUCAGCAGCACAAGCUACAUGUCUGUCCAAUCAGAACGCCCAGGAGGAAACAAGAAAAUCAGACCAAAGGGAAUAGAAGAGGGAGGGAAAGAAGGGGAUAAGCAUGAAGAGAUAGUUCAUGAGAAGGAAGAGGUAAAGGAAGAAAGAAUUAAUGAGAAUGAGAAAGGGAAAGAGAUUGCCAAAACGUGUAAUAAGGAGAAAAACAGAGAAUCAGGAGACGAGGAAAAAACACAAGAUAUACACGAGCAAGGGAAAGAAAAAGAACAGUGGAAUAAAGAGGAUUUGCAAAGGAGAUUCUCACAAGAUGAUACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-101.10 kcal/mol

Ensemble Metrics

Free Energy: -110.34

Frequency: 0.0000

Diversity: 105.08

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((((......((((.((........))..)))).......))).))))....((((((((((..(((((((...(((((...(((((.......)))))..........(((.....(((.(((..((((((.(((((....))))......).)))).))..))).)))))).(((((...))))).)))))..)))))))........))))).))))).(((..(((.(((((((...((((.(((.(((...))).)))((((((((....((....))(((((((((.(((..........(((.((..((..........))...))...)))..........))).))...............((((((.......))))))............................................((.((.....)).))...)))))))........................))))))))....))))...))))))))))..)))............................((((((((.(...).))))))))...............

Thermodynamic Ensemble Prediction

..{(({(,(,,....((((.({........)}..)))).......}}}.}}}}....((((((((({..(((((((...(((((...(((((.......)))))..........(((.....(((.(((..((((((.(((((....})))......).)))).))..))).)))))).{((((...))))}.)))))..)))))))......,.))))).))))).{((..(((.(((((((...((({.,{(.(({...})).)||((((((((.,.,((....))|{(((((((.(((..,,......(((.{{..{...........,,...))...)))..........))).)),..............((((((.......))))))..........,,,,..............................{{.,,.....)),))...,))))),.....................,..))))))))},..}}))...))))))))))..)))...................,,.......((((((((.(...}.))))))))......,..,.}},.