Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0028800

Sequence Length

458 nt

GC Content

0.4105

AAGAACUGGACUCUACAAGGAGAAGAUAUGCAGUAUCGAUCAGGAUGGGAUCCUCAUAGAGGGGCAGAUAAUGUUUCUACUAAAUCUUCGGACAGUGAUGUAAGUGAUAUAUCUGCGGUUUCAAGGACUAGUAGUGCUUCUCGUUUCAGCAGCACAAGCUACAUGUCUGUCCAAUCAGAACGCCCAGGAGGAAACAAGAAAAUCAGACCAAAGGGAAUAGAAGAGGGAGGGAAAGAAGGGGAUAAGCAUGAAGAGAUAGUUCAUGAGAAGGAAGAGGUAAAGGAAGAAAGAAUUAAUGAGAAUGAGAAAGGGAAAGAGAUUGCCAAAACGUGUAAUAAGGAGAAAAACAGAGAAUCAGGAGACGAGGAAAAAACACAAGAUAUACACGAGCAAGGGAAAGAAAAAGAACAGUGGAAUAAAGAGGAUUUGCAAAGGAGAUUCUCACAAGAUGAUACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-73.60 kcal/mol

Ensemble Metrics

Free Energy: -82.17

Frequency: 0.0000

Diversity: 73.93

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((.(((((..((((............((((......))))...))))..)))))..(((.....)))(((((((...((((..........(((..(((.(((((((...((((.(((.(((...))).)))((((((((....((....))(((((((((.(((..........(((.((..((..........))...))...)))..........))).))...............((((((.......))))))............................................((.((.....)).))...)))))))........................))))))))....))))...))))))))))..)))...........))))..)))))))....((((((((.(...).))))))))...........))))

Thermodynamic Ensemble Prediction

.....((((.((((,...|||}..{{{{{...}||||..{{..|,||.,,}|||{.,,))),,(((.....}}}{((((((...((((.......{..(((..(((.(((((((...((((.,((.(((...))).))|((((((((.,.,((....))|((((((((.(((..,,......(((.{{..{...........,,...))...)))..........))).)),..............((((((.......))))))..........,,,,..............................,{.,,.....)),))...,))))),.....................,..))))))))},..})))...))))))))))..)))..,........})))..))))))}....((((((((.{...}.))))))))...........))))