Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RIMS2_0029600

Sequence Length

250 nt

GC Content

0.3720

AUAGAGCAAAGGACCAGCAAAGAAAAAUCACCUUGCUGGUGAAGAAUCCUCUACGCUGGAUCACUUUAUCUAUAGGAGACUUUUCUCUCUAAGGUUAUUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAGUGGCAAAAAGCGGCGCUCUAGCCUUGGUGCCAAAAUGGUAGCUAUCGUUGGUCUGUCACGGAAAAGUCGCAGUGCUUCUCAGCUCAGCCAAACGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-48.80 kcal/mol

Ensemble Metrics

Free Energy: -53.43

Frequency: 0.0005

Diversity: 65.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((((((((((..(((....(((((.....))))).......)))..))))).)).))))((((.(((((((....)))).)))))))...........................................................((.((.....)).)))))))).(((((((((((...))))((((......(((((((.((......)).)))).)))....))))..)))))..))

Thermodynamic Ensemble Prediction

{((({,{{{{((((((((,,,({....{{{{{,,,,,)))||,,.,{,,,,,..}}})),)}.)))){{((.(((((((....)))).))))))}.......................................................((((.(((((...,|.(((......)))}}..))))}...)))).,|}},{{{|{{,((({.,{.,,.,,||.}},}.}}},.},.}}.)}))}},.}))