Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RP11-732M18.3_0001400

Sequence Length

199 nt

GC Content

0.3769

CAUCUUAUUGAACAAAUACUUUUAGAGGACCUCCUAUGUUUAGGGCACUGUUGUAGAACCAGUGAAAGGAAGGAGAGCUGGAGUCCUGGGUCAAGCUGAGUAUCUCCACGUUUAGGUGCACAAAUACUAUUUUGUGAAGAUCUUAAAUUUGUGGUAUAAGAACUUGAAGGAAAUAGAACUGAUUUGUUACUUCUAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.90 kcal/mol

Ensemble Metrics

Free Energy: -42.70

Frequency: 0.0021

Diversity: 59.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((.....))))((((((((((...(((((....)))))(((((((....)).))))).((.(((..((..(((...((((...(((((.....(((..(((((((((((..((((((......)))))).....)))))))..)))).)))....)))))))))..)))..))..))).)).))))))))))

Thermodynamic Ensemble Prediction

.....{{{{.....}}},((((((((((..{(((({..,,|}}}.(((((((....)),})))).||.|,|,,||,,(((,,.{{((.,.({{{|}|.,|{{{|,|{{{{{(((((..((((((......))))))....,))}))}}.,)})),})}}},.)))}}}})),,}}},.|,..}}}})).))))))))))