Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RP11-732M18.3_0002900

Sequence Length

614 nt

GC Content

0.4202

GUGUGCAUCUCCAUGUCUGGCUGAUUUUUUUAUUUUUUGUAACGACGGGGUCUUGCUAUAUUGUCCAUGCUGGUCUGAAACUCCUAGGUUCAAGCCAUCCUCCUGCCUCAGCCUCCCAAUGUGUUGGGAUUAUGGGUGUGAGCCACUGUGCCCAGCCCAUUUUUACCAUUUUUAAAGUGUACAGUUCAGUGAUAUUAAAGUACAUUCACAUUAUUUUGCAACCAUUUGCCUUCAGAACUCUUUUCAUCUUACAAAACUAAAACUCUAUACCCAUUAAACACUAACUCUUUAUUUCCCCUCCCCUCAGCCCCUGGCACUCACCCUUCUACUUACUGUUUCUAUGAAUCCUACUGCUAUCUACUCUUGGUCCCUUAUAUCACUGGAGUCAUAAGGUAUUGGUCUUUUUGUGACUGGCUUAUUUCACCUAGCAUAAUGUCCUCAGAGUUCAUCCGUUUGGUAGCAUGUACCAGAAUUACUCUCCCUUUUAAGGCUGAAUGAUAUUUCAUUCUGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUACAUAUACCACAUUUUGUUUACCCGUUCAUCCAUCAGUGGACAUUUGGGUUGUUGCUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-124.10 kcal/mol

Ensemble Metrics

Free Energy: -137.83

Frequency: 0.0000

Diversity: 201.86

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((..........((((((..............(((..((((((((...)))...)))))..)))((((.(((..((...))..))).))))..........))))))((((((....))))))..((((((.((.((......)).))))))))................))))))).)(((((((((......(((((.(((((.....((((..((...(((((..(((((((.................................................................(((...)))...........(((((..((.((((((((........((((........))))........))).))))).))..)))))..((.(...(((((.((((..........))))))))).).))..))))))).....(((((((.....)))))))...............))))).((((((....))))))))..)))).....))))).))))).(((((.(((((((((......)))))))))))))).......(((((....((((....))))....))))))))))))))

Thermodynamic Ensemble Prediction

(((,{{{,..,,,.{,,.((((((......,,,.....|||,.{{{((({,...||.....,}},...}}((((.((({,((....)})))).)))).......,..})))))((((({....})))))..(((((({(({({,,{{{.||.,.}},}||.,,..........,,,)))))))}),{{(((({,......{{,{,.|||,,......((({....,))).....(({..,...,,.................}}}.}}}}}}},................................(({...)))......,.....,{{{..{{.,{{{{(((........((((........))))........))).})))}.})}}})}},..}}}....,|||))}}||.......}}}||||||,||,,.,{.,|||||||,,...,,{||{,{{{{{|||||{{{,.,.{{..(((....)))..||{|{{....}})))))).)))))))}|||}|||,|||,|,{,({((({((((((({{....})))))))))))))......,||{||..},|{||...}))))}.,,))))}})}))))))