Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RTN4_0008200

Sequence Length

162 nt

GC Content

0.4815

CAGCUGCAGACCCAAUGUAAUCACCAAGAGAGAAUGAAAACCUCCAACUACCAUGAAUCAGGCUUAACACAAAAUCAGGUUCGCCAUGUUGCCCAAGCUGGUCCCGAACUCCUGACCUCAAGUGAUUUGCCCACCUUCGCCUCUCAAAGUGUGGAAUUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-21.00 kcal/mol

Ensemble Metrics

Free Energy: -25.29

Frequency: 0.0010

Diversity: 28.43

Structure Visualization

Structure Prediction

MFE Structure Prediction

...............(((((((((...(((((..((((......(((.(((..(((.(((((...............(((((((((.(((.....))))))...)))))))))))..))).)))..)))......)))).)))))...)))....)))))).

Thermodynamic Ensemble Prediction

.....,.........(((((((((,..(((((..{({,......,,.......{{{....(((..,.(((....((((((((((((.(((.....)))))),..}))),.)))))..,...))).,..)))....}))}.)))))...},)}),.}))))).