Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_RTN4_0011000

Sequence Length

250 nt

GC Content

0.3560

GUGGAGGUUGCAGUGAGCUGAGAUAGCACCACUGCACUCCAGCCUGAGCGAGACUCCAUCUCAAAAAAAAAACAGUCUUGCUUUGUCACUCACCCAGUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUCUUUUUUUCAGACCUUAUCCCCCAUGCGGAGAUACAUUAUUAUUAUUAUUAUUGUUAUUUUGAGACACAGUCUUACUCAGUUGCCCCGGCUGGAGUACC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.26 kcal/mol

Ensemble Metrics

Free Energy: -49.43

Frequency: 0.0012

Diversity: 26.57

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.((((((.((((...))))..))))))(((((((((((((.((((((...((((((((....((((((....................((((............................................................))))..((((((......)).))))................)))))).))))))))...)))))).))))........))))))))))))

Thermodynamic Ensemble Prediction

.....(((.((((((.((((...))))..))))))(((((((((((((.((((((...((((((((....{(((({...,...,|..........,||,.............................................................}}}...(((({(,.....)).))))............,,..)})))}.))))))))...)))))).))))........))))))))))))