Sequence Details

BLAST PRIMER
Symbol
hsa_SATB2_0004000
Sequence Length
369 nt
GC Content
0.5285
GGAUUGUUGUCUGAGAUUCUGCGUAAGGAAGAAGACCCUCGGACAGCCUCUCAGUCUCUUCUAGUAAACCUGAGGGCCAUGCAGAAUUUCCUCAAUCUGCCAGAAGUGGAGCGAGAUCGCAUCUACCAGGAUGAGAGGGAGCGGAGCAUGAAUCCCAAUGUGAGCAUGGUCUCCUCGGCCUCCAGCAGUCCCAGCUCCUCCCGAACCCCUCAGGCCAAAACCUCGACACCGACAACAGACCUCCCUAUUAAGGUGGACGGCGCCAACAUCAACAUCACAGCUGCCAUUUAUGACGAGAUCCAACAGGAGAUGAAAAGGGCCAAGGUGUCUCAAGCCCUGUUUGCCAAAGUGGCUGCAAAUAAAAGUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-98.80 kcal/mol
Ensemble Metrics
Free Energy: -104.84
Frequency: 0.0001
Diversity: 98.90
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.((((((((((((.(((........)))......(((.(((((...............)))))))).))))))))))))((((.((((......((((((((....))).))))))))).)))).(((..(((.((((........))))((((..((.((.((.((...)))).)).))..))))...)))..))).(((((......))).))....))))))))...)))((.....((((.....))))...............((.(((((((.((.((((.(((....))).......(((((..((....))...))))).)))).))))))))).))...........))
Thermodynamic Ensemble Prediction
(((((((((((.((((((((((((.,((........})},,,...{{{.(({((...,.....,.....)))))))).}))))))))))){(({.((((......((((((((....))).)))))}})).))}|.(((,.((({(({(........}}}}((((.,((.({.{{.({...)))).)).}),,)))),},))}..})),||{((......))}.},....))))))))...)))((....{(((((.((((..................)))))))))}.,{.,.{..(((....)))..,....(((((..,{,...}}...))))),|,,((({...)))).}}........}}.))
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