Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0006200

Sequence Length

219 nt

GC Content

0.5342

AAUCCCUAUCCUGCCUCCGAUGUGAAUACUGAGAAGCCCAGCAUCCACAGCAGCACCAAAACUGUCUUGGAACAUCAACCAGGGCAGAGGGGGCGUAAACCAGGAAAGAAGCGGGGCCGGACACCCAAGACCCUAAUUUCCCAUCCCAUCUCUGCCCCAUCCAAGACAGCUGAACCUUUGAAAUUCCCAAAGAAGAGAGGUCCCAAACCUGGCAGCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.80 kcal/mol

Ensemble Metrics

Free Energy: -59.53

Frequency: 0.0024

Diversity: 25.92

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((...(((((.....((((.((.(((.......))).)).)))).((((........(((((((((..........((((((((((((.........(((((..((.((....((....))....))))..)))))...))).)))))))))..)))))))))))))...(((((.......))))).....((((.....)))))))))..))

Thermodynamic Ensemble Prediction

.....{{...(((((...,.((((.((.(((.,....,))).)).)))).|,,........((((((((((..........((((((((((((.,.......(((((..,,.(((,..((....))..,.))))..)))))..,))).}))))))))..))))))))))}}}...(((((.......))))).....((((.....)))))))))..})