Sequence Details

BLAST PRIMER
Symbol
hsa_SCMH1_0006300
Sequence Length
444 nt
GC Content
0.5270
AAGGACCAUUUUGGCAACAAUGAAAGGACGGAUUCAGAUGCUGGAGUCAGGGAUGCCAGUUAACAAGCUGUUAUAAUAUUCCAGUUGUGAUUCCAAAGAAUCCCUAUCCUGCCUCCGAUGUGAAUACUGAGAAGCCCAGCAUCCACAGCAGCACCAAAACUGUCUUGGAACAUCAACCAGGGCAGAGGGGGCGUAAACCAGGAAAGAAGCGGGGCCGGACACCCAAGACCCUAAUUUCCCAUCCCAUCUCUGCCCCAUCCAAGACAGCUGAACCUUUGAAAUUCCCAAAGAAGAGAGGUCCCAAACCUGGCAGCAAGAGGAAACCUCGGACUUUGCUGAACCCACCACCUGCCUCACCAACAACCAGCACUCCUGAACCGGAUACCAGCACUGUACCCCAGGAUGCUGCCACCAUCCCCAGCUCAGCCAUGCAGGCCCCAACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-116.50 kcal/mol
Ensemble Metrics
Free Energy: -122.87
Frequency: 0.0000
Diversity: 101.58
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((.((....((((.....((...(((.((.(((((..((((((((.....(((.(((((....))))).)))...))))))))...(((((....)))))......((((....(((((.....((....))....)))))....))))........((((((((((..........((((((((((((.........(((((..((.((....((....))....))))..)))))...))).)))))))))..))))))))))))))).(((((.......)))))....(((((........(((((((((((((...)))).....))))))...)))......))))).........(((((.(((((....((.(((.......))).))))))))))))...)).))).)).....))))....)).))......
Thermodynamic Ensemble Prediction
..((.((....((((.....((...(((.((,{((({,,((((((({,{({{(({.(((({....})))).}||..,,},,}}))}}}||{||....)}))),,...,|{({....{{(((,.,,.(({...,}..,,)}))},,,,))})........((((((((((..........((((((((((((.,.......(((((..,,.(((,..((....))..,.))))..)))))..,))).}))))))))..)))))))))),}}...(((((.......)))))....(((((........{((((((((((((...)))).....))))))...},,......))))).........|||||.(((((....((.({{.,....,))}.)}))))))))))...,,.))).)).....))))....)).))......
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