Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0007200

Sequence Length

250 nt

GC Content

0.3720

AAGGACCAUUUUGGCAACAAUGAAAGGACGGAUUCAGAUGCUGGAGUCAGGGAUGCCAGUUAACAAGCUGUUAUAAUAUUCCAGGUGAGAGAGAAAAUUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACACCCAAGACCCUAAUUUCCCAUCCCAUCUCUGCCCCAUCCAAGACAGCUGAACCUUUGAAAUUCCCAAAGAAGAGAGGUCCCAAACCUGGCAGCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-30.72 kcal/mol

Ensemble Metrics

Free Energy: -35.39

Frequency: 0.0005

Diversity: 34.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((.((((((......(.(((((.....(((((.(((((((..((((((((.(((((....))))).............((((.((((...........................................................................)))).)))).)))))))).....))).)).)).)))))))))).).....))))))......)))))....(.((....)).)

Thermodynamic Ensemble Prediction

..(((((.((((((......,.(((((.....(((((.((((((({.((((((((.(((((....))))).............((((.(({(...........................................................................)))).)}}).)))))))).....)))},).)).)))))))))).,...,.)))},,..,}}.)))))......({....}}.}