Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0011300

Sequence Length

306 nt

GC Content

0.5033

GUCAUUUUACCUGGGACAAAUACCUAAAAGAAACAUGUUCAGUCCCAGCGCCUGUCCAUUGCUUCAAGCAGUCCUACACACCUCCAAGCAACGAGUUCAAGAUCAGUAUGAAAUUGGAAGCACAGGACCCCAGGAACACCACAUCCACCUGUAUUGCCACAGUAGUUGGACUGACAGGUGCCCGCCUUCGCCUGCGCCUUGAUGGGAGCGACAACAAAAAUGACUUCUGGCGGCUGGUUGACUCAGCUGAAAUCCAGCCUAUUGGGAACUGUGAAAAGAAUGGGGGUAUGCUACAGCCACCUCUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-72.50 kcal/mol

Ensemble Metrics

Free Energy: -79.28

Frequency: 0.0000

Diversity: 90.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((..(((((((........................)))))))..(((((((..((((((................(((........)))..(((..(((...)))..)))))))))..))))...)))...........(((((((....((((....).)))....)))))))...((....)).(((.(((....))).)))......))))))))(...((.(((((((..((((.((((.....))))(((((...............)))))))))..))..))))).))....)

Thermodynamic Ensemble Prediction

((((((((..{((((((..,.,..............}},..))))))|{{((((((,..((((,,.}}}|{(({,,,....{((.,,.,...||}{{{{{..{{.,,.})}..))))),}}|,{||,,...,((....,,...,,|,|||||...,|,||.},.)},))},,})))))))}..({....}}.,{(.(({....))).)))......))))))))(...((.(((((({..((((.{(({....,)))|({,,,,},..||,......,,,}}}))))..}}..))))).))....)