Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0011500

Sequence Length

250 nt

GC Content

0.3320

UUUUUCAACCUUUACCAGCUACAUACUAAGGAUAAAAAGGUGAGAAUAAGAUAGGGUUUCUUCCCUCAGUGGGUUUUACUAUUUAGGUGACAGAUAUAAUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGACAACAAAAAUGACUUCUGGCGGCUGGUUGACUCAGCUGAAAUCCAGCCUAUUGGGAACUGUGAAAAGAAUGGGGGUAUGCUACAGCCACCUCUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.60 kcal/mol

Ensemble Metrics

Free Energy: -42.34

Frequency: 0.0005

Diversity: 54.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((..((((((.....((........)).....)))))))))))(((((...((((((((((((.(((((......))))).))).)).)))........................................................((((((..............(((((((((((.....)))))))....))))((((((...............)))))).)).))))..))))...)))))

Thermodynamic Ensemble Prediction

((((((,{(((((.....((........}).....)))))))))))(((((..{((,.,,,{||((,(((((,,.,,{||}},.,)),)),|||...........................................................................,|||{(((((((.....}))))))....}}))|||}}}}},..{{......,,..,|||{{{........))).)))))))