Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0013800

Sequence Length

250 nt

GC Content

0.3040

AUUUCUACAUCGUACUAAGGAAGAAUGAUUUCCUAUUUGAUAUAGCUGAACCAUGCAAAAAUCAGAUCCUUGAAAAGGUCAGAACCUGUAUUUAUACAUANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUGUCAGAAGUCAGAGCAAGGUAUUGGUGGAUCCAGGGAUAAAUCCCAAACUUCUUAACCCCUAGACCGGUUUUUAGUCCAUUGACUAUGCAGCCUAAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.50 kcal/mol

Ensemble Metrics

Free Energy: -36.82

Frequency: 0.0009

Diversity: 45.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((........((((((.....))))))(((((((...((........))....)))))))........((((....))))(((....)))......................................................))).))))))((.....((((..(((.....)))((((....))))((((((((........)))..))))).(((((....)))))....))))..))

Thermodynamic Ensemble Prediction

(((((((((........((((({.....}))))){((((((...((........))....))))))}..,,....{||{....}})}{{{....,}}......................................................))).))))))((..{{..{((,,{((((({,...((((....)))),,{{,{{{..,,,...}}}..)))),.,,|||}}}}))}))},,.))},..))