Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SCMH1_0013900

Sequence Length

250 nt

GC Content

0.3360

AAAAAGUUUGCCAACCCCUGCUCUAGGAGUGGGCUUUGGAUAUGAAAAGAAGAGGAAUGUGAAUUGGUGAAGCAUAAGUGUGCAUCAUAAUGCAAUGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUGUCAGAAGUCAGAGCAAGGUAUUGGUGGAUCCAGGGAUAAAUCCCAAACUUCUUAACCCCUAGACCGGUUUUUAGUCCAUUGACUAUGCAGCCUAAUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-36.70 kcal/mol

Ensemble Metrics

Free Energy: -40.09

Frequency: 0.0041

Diversity: 38.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((..((((((((.......((((((.((((.............(((....))).((((.((((....)))).))))...............................................................)))).))))))))))).)))..)))))))))...((((....)))).....(((........)))..((((..(((((....)))))...)))).....

Thermodynamic Ensemble Prediction

.....(((((((((..((((((((.......((((({.((({...............{.{..|||.((((.((((....)))).)))).,,.},.........................................................}))).}))))))))))},))..)))))))))...((((....)))).....{{{........})}..((({..(((((....))))).,.}))).....