Sequence Details

BLAST PRIMER
Symbol
hsa_SETDB1_0005000
Sequence Length
250 nt
GC Content
0.3200
GAUGACAAAAGAUGUGAGUGGAUCUAUCGAGGCUCUACACGGCUGGAGCCCAUGUUCAGCAUGAAAACAUCCUCAGCCUCUGCACUGGAGAAGAAGCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUAACAGACUUUGUUCUUAGAAUGGAGCCUGUGUAUCUACUAUCUCCAGUUUGUAUUAUUUCUUGAAAGUCUUUUAACAAUAUGAUAAAACUAAGAUUGUG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-39.70 kcal/mol
Ensemble Metrics
Free Energy: -44.58
Frequency: 0.0004
Diversity: 38.78
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.....((((........)))).....(((((((......)))))))(((((...)))))............((.(((..........))).)).......................................................((((.((((((((...)))))))).)))).))))(((.((((..(((((.((((((...((((((...))))))....))))))))))).)))).)))
Thermodynamic Ensemble Prediction
((({,(...,((({,,,....}}}}.,,..(((((((......)))))))(((((...)))))....,.||,,,,{{,{{{.,...,,,}.,},.}}.......................................................((((.((((((((...)))))))).))))}))))(((.((((..(((((.((((((,..((((({...}))))).,,.))))))))))).)))).)))
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