Sequence Details

BLAST PRIMER
Symbol
hsa_SHKBP1_0000600
Sequence Length
214 nt
GC Content
0.5654
AUCUUCAUCGACAGGGACCCUACAGUCUUCGCCCCCAUCCUCAACUUCCUGCGCACCAAAGAGUUGGAUCCCAGGGGUGUCCACGGUUCCAGCCUCCUCCAUGAAGCCCAGUUCUAUGGGCUCACUCCUCUGGUUCGUCGCCUGCAGCUUCGAGAGGAGUUGGAUCGAUCUUCUUGUGGAAACGUCCUCUUCAAUGGUUACCUGCCGCCACCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-54.30 kcal/mol
Ensemble Metrics
Free Energy: -59.41
Frequency: 0.0002
Diversity: 63.16
Structure Visualization
Structure Prediction
MFE Structure Prediction
....((((.((..(((((.((((((....((((((.....(((((((..((.....))..)))))))......))))))....((((.(((((.(((((..((((((.(((....((((((.((......))))))))...)))..)))))).))))))))))))))......))))))....)))))..)).))))....(((.......)))
Thermodynamic Ensemble Prediction
({{.,{{{.{{..(((((,.....{{...((((((..,,.{((((((..((.....))..))))))),.....))))))...}|||}|||,{,,{,,{{..{{{((((((......)))))}|{{{{{{{{,|,||{,.{,..,..)),.)})))))))))))),,))}{{..,.((((....,,||.......,)).....,,}}})....))
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