Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SLIT1_0000400

Sequence Length

197 nt

GC Content

0.4264

GUGUGUCUUGGAUGGAGAACCCGGUGGAUAAUGCCAAGAAGUCAGGAGCUUGGAGAGGGGGGCCCAAGGUUAAAGAUAUUGACCAUGACAAGUAAUAAAAAAAUAGCAUUUCUCUUCCCCUGUUCUGUCUCACUUGUGAAUUCUUGAGGAAACUUGAUCCUUUUCUUUUCUAGACCCAGUAAGCUAGUAGAAUGUGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.00 kcal/mol

Ensemble Metrics

Free Energy: -41.75

Frequency: 0.0004

Diversity: 42.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((.((((.(((.((((((...(((.((...(.(((((((.(((.(((...(((.(((((((.....((((((.....))))))..((.((((..((......))..)))).))))))))).))).......))).))).)))))).).)...)).))).)))))).))).)))).))....((.........))..

Thermodynamic Ensemble Prediction

.((.((((.(((.((((((...(((.((...{.(((((((.(((.(((...(((,(((((({..{{.((((((.....)))))).}|...,({..{.......},,.,,,,....}))))).)))}..},..))).))).)))))).).}...)).))).)))))).))),)))).))....((.........))..