Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNCA_0001000

Sequence Length

267 nt

GC Content

0.3783

UUGAAACAUUUACGUUGCUCAAGAUCUCACUGGUACCAUCUACUAUUAGGUGAUUGCCAAGACUAAAGAAACAGCUAGAAGGGCAAAAGACAAGAAAAUCAGUAAGAUAGUAACAGAUUAUCCAAAGUAGAGCACGGCUCAGGUAUGGAUUAUGUAUAAUGUAUUUAAGAUAUGACUUACAGCGUUCACCAAUGUGACUAUUCCCAAGUGAUCCAGAUGGCUGAUGACAUAGUAAUUUGUACAUUUGCUGAGACCUGAUCUGAGUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.00 kcal/mol

Ensemble Metrics

Free Energy: -53.37

Frequency: 0.0000

Diversity: 86.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.......(((((((((((....((((.((((((..((((((....)))))).(((((....(((..........)))...)))))...........)))))).))))))))))............)))))..)(.((((((((..((.(((.(((.(((((((......((((..(((((((..((......((.(((.......))).))...))..)))).))))))).......)))))))))))))..))..)))))))).)

Thermodynamic Ensemble Prediction

.,{{,....}}}..{(((((,,((((,..,(((({.((((((....)))))).,||||,...,,.........{{|,,...))),,............((((((((,{.((,{(((((((({,,...,.{{((...}}}}.,.,.||||{,,((({..,{(({{,...|}}}},...))}},,||{({(....))}|,,,,......||}||}}|..},)))),}}}},},))))))))))),))))))))...},)))))))))))