Sequence Details

BLAST PRIMER
Symbol
hsa_SNCA_0002600
Sequence Length
378 nt
GC Content
0.5238
AGAGAGGCGGGGAGGAGUCGGAGUUGUGGAGAAGCAGAGGGACUCAGUGUGGUGUAAAGGAAUUCAUUAGCCAUGGAUGUAUUCAUGAAAGGACUUUCAAAGGCCAAGGAGGGAGUUGUGGCUGCUGCUGAGAAAACCAAACAGGGUGUGGCAGAAGCAGCAGGAAAGACAAAAGAGGGUGUUCUCUAUGUAGGCUCCAAAACCAAGGAGGGAGUGGUGCAUGGUGUGGCAACAGUGGCUGAGAAGACCAAAGAGCAAGUGACAAAUGUUGGAGGAGCAGUGGUGACGGGUGUGACAGCAGUAGCCCAGAAGACAGUGGAGGGAGCAGGGAGCAUUGCAGCAGCCACUGGCUUUGUCAAAAAGGACCAGUUGGGCAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-99.10 kcal/mol
Ensemble Metrics
Free Energy: -105.35
Frequency: 0.0000
Diversity: 80.03
Structure Visualization
Structure Prediction
MFE Structure Prediction
....(.((.(.(..(((((....((((......))))...)))))..).).)).)...((..(((.((((((((.(.(((..(((((.....((((((.....((..((..((((((...((((((.(((.....(((......)))....))).)))))).......(((..(((((....))))).))).))))))....))..)).))))))....)))))....))).).)))))))))))..)).........((.((...((((.....))))...)).)).(.(((....))).).(((((((((.((((((..(..((((......))))..)..)))))).))))(((......)))....)))))...
Thermodynamic Ensemble Prediction
....(.((.(.(..(((((....((((......))))...)))))..).).)).)...((..(((.((((((((.{.(((..{({((.....{((({{.....{{..,,.,||,{{{.,.,((((({((,.....(((......)))....},,.))))))}}.....||,..{{{{,...,}))||,|||,.|||((....|,..,}.,)))))..}}))))).,..))).}.)))))))))))..)).....,{..((.((...((((.....))))...)).)).,,},|..,.}),.,.(((((((((.((((((..(..((((......))))..)..)))))).)))}(((......)))...,)))))...
Back