Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0001900

Sequence Length

250 nt

GC Content

0.3960

GAUCACAGAACAAUGACAAAAGACAAUUUCUGCUGGAGCGACUGCUGGAUGCAGUGAAACAGUGCCAGAUCCGCUUUGGAGGGAGAAAGGAGAUUGCCUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUGUAGAGAUGGGGUCUCACUAUGUUGCCCAGGCUGGUCUCAAACUUGUGGACUCAAGUGAUCCUCCCACCUUGGCCACCCAAAGUGUUGGUAUUACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.13 kcal/mol

Ensemble Metrics

Free Energy: -50.66

Frequency: 0.0006

Diversity: 73.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((((...((........))..)))))(((.....(((((.....)))))....)))....(((((.((((.((.(.((.(.((((((((.((((........................................................)))..).)))))).)).).)).))))))).)))))...(((((......)))))))))(((((((.((((....)))).)))..))......))

Thermodynamic Ensemble Prediction

(((((({{,,...,,......,.,,.,|}}||(((,.,(,{((((.,...}|}}}|...))}}}},|{{{{|||||{{(.(,{(.,.{{({{{{|.||||........................................................}}}},},|})))},}}.},}},)))}}}}.})}}},..,,|||,,,,,,),,))))))(((((((.((((....)))).)))..))......))