Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0005700

Sequence Length

252 nt

GC Content

0.5913

AGCCCGUGUUCUGGUACUACGUGAAGGAGGUCCUCAACAAGCACGAGCUGCAGCGCUUCUACUCCCUGCGCCACAUCGCCUCAGACGUGGGCCGGGGUCGCGCCUGGCUGCGCUGUGCCCUCAACGAACACUCCCUGGAGCGCUACCUGCACAUGCUCCUGGCCGACCGCUGCAGGCUGAGCACUUUUUAUGAAGACUGGUCUUUUGUGAUGGAUGAAGAAAGGUCCAGUAUGCUUCCUACCAUGGCAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-80.80 kcal/mol

Ensemble Metrics

Free Energy: -84.49

Frequency: 0.0025

Diversity: 43.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((....)))(((.(.(((.(.(.(((((((.........((.((..((((((((........(((.((.((((.((......)).)))))).)))((((.(((.((..(((.(((((......((....(((....)))))......)))))))).)).)))))))))))))))..)).)).((((....))))(((((.(((((.(.........).))))).)))))..))))))).)).))).).)))

Thermodynamic Ensemble Prediction

(((....)))(((.(.{,,{({(.(((((((.........((.{,{{((((((((........(((.((.((((.((......)).)))))).)))((((.(((.((..(((.(((((......{(....{||...,)}}})......)))))))).)).))))))))))))))),})}.)).((((....))))(((((.(((((.(.........}.))))).)))))..))))))).,)}))}.).)))