Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_SNX29_0013500

Sequence Length

250 nt

GC Content

0.3880

GUGCUCAGGACUCAAGGAUCACAGAGACAUCCUUCUGGAAGUUCCCAGAGUGCACUCCAGUUAGAACAGUUUGUGCCAAGGGGGAGAGGCAUGAAGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAUUCUUGUACCUGCAGAGAGAACGAGGUGCUCAAAGUCCAACUGAAGAAAUAUGUAGGAGCUGUCCAGAUGCUGAAAAGAGAAGGUCAAACAGCUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.60 kcal/mol

Ensemble Metrics

Free Energy: -43.76

Frequency: 0.0002

Diversity: 48.74

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.(((........)).).))).)).)((((((((((((((.(.(.....((.(((((.((....((((((((..........))))))))..............................................................((((((............))))))......)).))))).)).....).).)))))).))))...((((....((.....))...)))).))))

Thermodynamic Ensemble Prediction

((((((.{(({{...,|,}}.}.))).)),){{((((((((((((.,.,,,,..((.(((((.({.{..{(((((((..........))))))}|{{{,.....................................................,}}},((((((............)))))).....,)).))))).)).....}.}.)))))).)))))}.((((....{{.....))...))))..,})